CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
L898_g18704
(
Steinernema monticolum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L898_g18704
T154748_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g18704.t1
C2H2 ZF
499
522
YKCPYCDHRTKEKSAVEKHIRCIH
L898_g18704.t1
C2H2 ZF
528
550
YKCRYCHQAFKVQSNLVRHIRAH
L898_g18704.t1
C2H2 ZF
556
579
YVCKKCGTSYADKKNMDAHVFREH
Links
Other
C2H2 ZF
family TFs
Other
Steinernema monticolum
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nRc.2.0.1.g08040
Romanomermis culicivorax
nRc.2.0.1.g08040
N
0.823
SBAD_0000967501
Soboliphyme baturini
SBAD_0000967501
N
0.820
L596_g21745
Steinernema carpocapsae
L596_g21745
N
0.820
L889_g7628
Steinernema feltiae
L889_g7628
N
0.820
ASU_10059
Ascaris suum
ASU_10059
N
0.811
TCNE_0001713301
Toxocara canis
TCNE_0001713301
N
0.811
L892_g27264
Steinernema scapterisci
L892_g27264
N
0.809
nDi.2.2.2.g06983
Dirofilaria immitis
nDi.2.2.2.g06983
N
0.807
OFLC_0000366301
Onchocerca flexuosa
OFLC_0000366301
N
0.807
WBGene00237321
Onchocerca volvulus
WBGene00237321
N
0.807
nDi.2.2.2.g01943
Dirofilaria immitis
nDi.2.2.2.g01943
N
0.807
SMUV_0000029701
Syphacia muris
SMUV_0000029701
N
0.804
WUBG_07684
Wuchereria bancrofti
WUBG_07684
N
0.804
EVEC_0000885601
Enterobius vermicularis
EVEC_0000885601
N
0.804
ASIM_0001575301
Anisakis simplex
ASIM_0001575301
N
0.804
EEL_0001045501
Elaeophora elaphi
EEL_0001045501
N
0.797
TCLT_0000540001
Thelazia callipaeda
TCLT_0000540001
N
0.780
PPA03503
Pristionchus pacificus
PPA03503
N
0.773