CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig1748.frz3.gene3
(
Meloidogyne hapla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MhA1_Contig1748.frz3.gene3
T154966_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig1748.frz3.gene3
C2H2 ZF
996
1018
YECKECSKPFGQLSNLKVHLRTH
MhA1_Contig1748.frz3.gene3
C2H2 ZF
1024
1046
YKCSKCNKGFTQLAHLQKHDLVH
MhA1_Contig1748.frz3.gene3
C2H2 ZF
1052
1074
HRCEVCDKRFSSTSNLKTHLRLH
MhA1_Contig1748.frz3.gene3
C2H2 ZF
1080
1102
YSCDRCNLSFTQLVHLKLHQRIH
MhA1_Contig1748.frz3.gene3
C2H2 ZF
1108
1129
FACTQCGRNYISPSGLRTHWKN
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne hapla
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy