MhA1_Contig334.frz3.gene6 (Meloidogyne hapla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MhA1_Contig334.frz3.gene6 T154978_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.761 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig334.frz3.gene6 C2H2 ZF 70 92
MhA1_Contig334.frz3.gene6 C2H2 ZF 98 120
MhA1_Contig334.frz3.gene6 C2H2 ZF 126 148

Links

Other C2H2 ZF family TFs
Other Meloidogyne hapla TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN06681 Caenorhabditis brenneri CBN06681 I 0.779
BXY_1109100 Bursaphelenchus xylophilus BXY_1109100 N 0.777
RSKR_0000546900 Rhabditophanes kr3021 RSKR_0000546900 N 0.774
L898_g10136 Steinernema monticolum L898_g10136 I 0.771
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.771
L898_g24033 Steinernema monticolum L898_g24033 I 0.771
L893_g11388 Steinernema glaseri L893_g11388 I 0.771
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.771
L889_g19596 Steinernema feltiae L889_g19596 I 0.771
L892_g2739 Steinernema scapterisci L892_g2739 I 0.771
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.771
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.771
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.771
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.771
TELCIR_11883 Teladorsagia circumcincta TELCIR_11883 I 0.771
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.771
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.771
Bm4236 Brugia malayi Bm4236 I 0.771
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.771
NECAME_01009 Necator americanus NECAME_01009 I 0.771
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.771
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.771
ASU_12247 Ascaris suum ASU_12247 I 0.771
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.771
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.771
LOAG_03108 Loa loa LOAG_03108 I 0.771
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.771
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.771
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.771
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.771
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.771
HCOI00724700 Haemonchus contortus HCOI00724700 I 0.771
SBAD_0000635801 Soboliphyme baturini SBAD_0000635801 I 0.767
L893_g11389 Steinernema glaseri L893_g11389 I 0.767
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.767
L898_g9710 Steinernema monticolum L898_g9710 I 0.764
CRE00458 Caenorhabditis remanei CRE00458 I 0.761
CBG14093 Caenorhabditis briggsae CBG14093 I 0.761
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.761
L596_g623 Steinernema carpocapsae L596_g623 I 0.757
CBN25393 Caenorhabditis brenneri CBN25393 I 0.757
CJA18701 Caenorhabditis japonica CJA18701 I 0.757