MhA1_Contig454.frz3.fgene1 (Meloidogyne hapla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MhA1_Contig454.frz3.fgene1 T154982_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bcl-11
M00641_2.00 		Caenorhabditis elegans
NNTGACCRNN
NNYGGTCANN		 PBM
Narasimhan et al.(2015)
pTH10807 		0.804 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig454.frz3.fgene1 C2H2 ZF 1076 1098
MhA1_Contig454.frz3.fgene1 C2H2 ZF 1104 1126
MhA1_Contig454.frz3.fgene1 C2H2 ZF 1134 1155

Links

Other C2H2 ZF family TFs
Other Meloidogyne hapla TFs

Invalid Input OrderBy

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action