MhA1_Contig599.frz3.gene7 (Meloidogyne hapla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MhA1_Contig599.frz3.gene7 T154988_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sptf-3
M00632_2.00 		Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN		 PBM
Narasimhan et al.(2015)
pTH9394 		0.795 0.855
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig599.frz3.gene7 C2H2 ZF 487 509
MhA1_Contig599.frz3.gene7 C2H2 ZF 515 539
MhA1_Contig599.frz3.gene7 C2H2 ZF 545 567

Links

Other C2H2 ZF family TFs
Other Meloidogyne hapla TFs

Invalid Input OrderBy

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action