CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g09713
(
Acanthocheilonema viteae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nAv.1.0.1.g09713
T155057_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t09713-RA
C2H2 ZF
64
87
YICDECGRCFTLKQNVQYHIVTYH
nAv.1.0.1.t09713-RA
C2H2 ZF
101
124
YVCLTCQKVYRNAEAARQHNARDH
nAv.1.0.1.t09713-RA
C2H2 ZF
133
156
HRCSTCTRIFPNNTQLKEHISIQH
nAv.1.0.1.t09713-RA
C2H2 ZF
162
185
YVCDKCGSCFGRQGGLRRHRIMVH
nAv.1.0.1.t09713-RA
C2H2 ZF
222
244
FACFECGKRFVRRNDQRVHELLH
nAv.1.0.1.t09713-RA
C2H2 ZF
250
271
FDCYKCGQRFRRQIYLKKHESS
Links
Other
C2H2 ZF
family TFs
Other
Acanthocheilonema viteae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_10360
Loa loa
LOAG_10360
N
0.798
WUBG_01421
Wuchereria bancrofti
WUBG_01421
N
0.784
OFLC_0000080401
Onchocerca flexuosa
OFLC_0000080401
N
0.764
WBGene00247726
Onchocerca volvulus
WBGene00247726
N
0.764
nLs.2.1.2.g00730
Litomosoides sigmodontis
nLs.2.1.2.g00730
N
0.758