CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NBR_0001172801
(
Nippostrongylus brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NBR_0001172801
T155093_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001172801-mRNA-1
C2H2 ZF
124
146
HICEICGKGFPYHSILESHKRCH
NBR_0001172801-mRNA-1
C2H2 ZF
152
174
FNCHFCDKKFAQKATLQVHERTH
NBR_0001172801-mRNA-1
C2H2 ZF
180
203
YKCRYCEKTFAQYGTKTVHEKSAH
NBR_0001172801-mRNA-1
C2H2 ZF
209
231
YKCPKCDKCLSSPSALYTHKKTH
NBR_0001172801-mRNA-1
C2H2 ZF
236
259
FQCEFCPKTFTLKNYLKLHVKQVH
NBR_0001172801-mRNA-1
C2H2 ZF
266
288
HVCRFCGKSFAYAGSLQVHVRTH
NBR_0001172801-mRNA-1
C2H2 ZF
294
316
YRCSYCPKAFASQGNLQSHERTH
NBR_0001172801-mRNA-1
C2H2 ZF
322
344
YSCTTCGRSFIQKSQLIAHEATH
NBR_0001172801-mRNA-1
C2H2 ZF
385
400
YVCKFCGKRYAYASSL
NBR_0001172801-mRNA-1
C2H2 ZF
401
421
CQYCDKCFTNQGNMQVHQRVH
NBR_0001172801-mRNA-1
C2H2 ZF
427
448
YSCNACGKSYAQKVGLKIHLEQ
Links
Other
C2H2 ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy