CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001957501
(
Nippostrongylus brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NBR_0001957501
T155110_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001957501-mRNA-1
C2H2 ZF
193
214
FSCERCGKVFSYSYYRDKHLKY
NBR_0001957501-mRNA-1
C2H2 ZF
225
248
FPCPICPRSFEKKDRLRIHILHVH
NBR_0001957501-mRNA-1
C2H2 ZF
254
276
HLCSICGKAFSQSSSLNKHLRVH
NBR_0001957501-mRNA-1
C2H2 ZF
282
304
YTCPFCPKAFTASSILRTHMRQH
NBR_0001957501-mRNA-1
C2H2 ZF
310
333
FKCAHCGKPFASHAAHDSHVRRNH
Links
Other
C2H2 ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPLM_0001086701
Haemonchus placei
HPLM_0001086701
N
0.801
HCOI00592400
Haemonchus contortus
HCOI00592400
N
0.801
ANCCEY_01743
Ancylostoma ceylanicum
ANCCEY_01743
N
0.795
SVUK_0000940401
Strongylus vulgaris
SVUK_0000940401
N
0.787
F47E1.3
Caenorhabditis elegans
WBGene00018567
N
0.778
CRE14814
Caenorhabditis remanei
CRE14814
N
0.776
BGLB009174
Biomphalaria glabrata
BGLB009174
N
0.766
Pvit_15018
Pogona vitticeps
Pvit_15018
N
0.762
Brh_R010198
Buceros rhinoceros
Brh_R010198
N
0.761
ENSFALG00000008315
Ficedula albicollis
ENSFALG00000008315
N
0.761
ENSTGUG00000011457
Taeniopygia guttata
ENSTGUG00000011457
N
0.761
ENSOANG00000022146
Ornithorhynchus anatinus
ENSOANG00000022146
N
0.760
prdm14
Takifugu rubripes
ENSTRUG00000011758
N
0.759
SBAD_0000104601
Soboliphyme baturini
SBAD_0000104601
N
0.759
ENSGMOG00000016524
Gadus morhua
ENSGMOG00000016524
N
0.759
SMU15027586
Schmidtea mediterranea
SMU15027586
N
0.756