CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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nDi.2.2.2.g06335
(
Dirofilaria immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nDi.2.2.2.g06335
T155165_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH
DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.767
0.712
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY
RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.761
0.758
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH
DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.761
0.758
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nDi.2.2.2.t06335
C2H2 ZF
234
253
PICNKFYTKSSHLKAHMRMH
nDi.2.2.2.t06335
C2H2 ZF
259
283
YVCKWNGCQWRFARSDELTRHNRKH
nDi.2.2.2.t06335
C2H2 ZF
289
311
FHCNHCFRTFSRSDHLSLHLKRH
Links
Other
C2H2 ZF
family TFs
Other
Dirofilaria immitis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy