CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NECAME_14596
(
Necator americanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NECAME_14596
T155298_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
che-1
M00609_2.00
Caenorhabditis elegans
NGAARCCHNN
NNDGGYTTCN
PBM
Narasimhan et al.(2015)
pTH10015
0.769
0.826
che-1
M08451_2.00
Caenorhabditis elegans
SGYTTC
GAARCS
COMPILED
Mathelier et al.(2014)
MA0260.1
0.769
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NECAME_14596
C2H2 ZF
25
47
FRCQLCGKTFSQAANLTAHKRVH
NECAME_14596
C2H2 ZF
53
75
FTCPMCNRRFSQSSSLVTHRRTH
NECAME_14596
C2H2 ZF
81
103
YQCTHCDKKFTDSSTLTKHLRTH
NECAME_14596
C2H2 ZF
109
131
YACEVCFMRFTQSGNLHRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Necator americanus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy