nLs.2.1.2.g09142 (Litomosoides sigmodontis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 nLs.2.1.2.g09142 T155361_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bcl-11
M00641_2.00
Caenorhabditis elegans
NNTGACCRNN

NNYGGTCANN
PBM
Narasimhan et al.(2015)
pTH10807
0.817 0.897
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t09142-RA C2H2 ZF 392 414
nLs.2.1.2.t09142-RA C2H2 ZF 420 442
nLs.2.1.2.t09142-RA C2H2 ZF 450 471

Links

Other C2H2 ZF family TFs
Other Litomosoides sigmodontis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_24528 Ancylostoma caninum ANCCAN_24528 I 0.788
ANCCEY_05532 Ancylostoma ceylanicum ANCCEY_05532 I 0.788
ANCDUO_15498 Ancylostoma duodenale ANCDUO_15498 I 0.762
ASIM_0001463201 Anisakis simplex ASIM_0001463201 I 0.797
ASU_10535 Ascaris suum ASU_10535 I 0.824
bcl-11 Caenorhabditis elegans WBGene00017430 D 0.817
Bm3354 Brugia malayi Bm3354 I 0.827
BXY_0383300 Bursaphelenchus xylophilus BXY_0383300 I 0.797
CBG18919 Caenorhabditis briggsae CBG18919 I 0.817
CBN13459 Caenorhabditis brenneri CBN13459 I 0.817
CJA41396 Caenorhabditis japonica CJA41396 I 0.817
CRE30875 Caenorhabditis remanei CRE30875 I 0.817
D917_09068 Trichinella nativa D917_09068 I 0.794
D918_08675 Trichuris suis D918_08675 I 0.794
DICVIV_00143 Dictyocaulus viviparus DICVIV_00143 I 0.761
DME_0000006201 Dracunculus medinensis DME_0000006201 I 0.824
EFV59674 Trichinella spiralis EFV59674 I 0.794
EVEC_0001125701 Enterobius vermicularis EVEC_0001125701 I 0.820
GPLIN_001288500 Globodera pallida GPLIN_001288500 I 0.804
HCOI00904800 Haemonchus contortus HCOI00904800 I 0.785
HCOI01698200 Haemonchus contortus HCOI01698200 I 0.785
HPLM_0001331501 Haemonchus placei HPLM_0001331501 I 0.785
L596_g14520 Steinernema carpocapsae L596_g14520 I 0.817
L889_g19350 Steinernema feltiae L889_g19350 I 0.817
L892_g10848 Steinernema scapterisci L892_g10848 I 0.817
L898_g13372 Steinernema monticolum L898_g13372 I 0.817
LOAG_18740 Loa loa LOAG_18740 I 0.827
MhA1_Contig454.frz3.fgene1 Meloidogyne hapla MhA1_Contig454.frz3.fgene1 I 0.804
Minc07594 Meloidogyne incognita Minc07594 I 0.801
nAv.1.0.1.g03797 Acanthocheilonema viteae nAv.1.0.1.g03797 I 0.827
nDi.2.2.2.g00707 Dirofilaria immitis nDi.2.2.2.g00707 I 0.827
NECAME_02245 Necator americanus NECAME_02245 I 0.762
nOo.2.0.1.g03888 Onchocerca ochengi nOo.2.0.1.g03888 I 0.824
OFLC_0000354401 Onchocerca flexuosa OFLC_0000354401 I 0.827
PPA20237 Pristionchus pacificus PPA20237 I 0.800
PTRK_0001160400 Parastrongyloides trichosuri PTRK_0001160400 I 0.813
RSKR_0000889800 Rhabditophanes kr3021 RSKR_0000889800 I 0.817
SBAD_0000338201 Soboliphyme baturini SBAD_0000338201 I 0.790
scaffold248-EXSNAP2012.2 Pristionchus exspectatus scaffold248-EXSNAP2012.2 I 0.800
SMUV_0000624601 Syphacia muris SMUV_0000624601 I 0.820
SPAL_0001358300 Strongyloides papillosus SPAL_0001358300 I 0.813
SSTP_0000584500 Strongyloides stercoralis SSTP_0000584500 I 0.813
SVE_0953600 Strongyloides venezuelensis SVE_0953600 I 0.813
TCNE_0001279201 Toxocara canis TCNE_0001279201 I 0.824
TELCIR_04334 Teladorsagia circumcincta TELCIR_04334 I 0.761
TELCIR_24378 Teladorsagia circumcincta TELCIR_24378 I 0.761
TMUE_s0041001100 Trichuris muris TMUE_s0041001100 I 0.794
WBGene00244008 Onchocerca volvulus WBGene00244008 I 0.824
WUBG_02612 Wuchereria bancrofti WUBG_02612 I 0.827