CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nOo.2.0.1.g02893
(
Onchocerca ochengi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nOo.2.0.1.g02893
T155384_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t02893-RA
C2H2 ZF
100
122
HICADCGKAFPYLSILESHKRCH
nOo.2.0.1.t02893-RA
C2H2 ZF
128
150
FDCRFCDKKFAQKATLQVHERTH
nOo.2.0.1.t02893-RA
C2H2 ZF
156
179
YKCKYCDKTFAQYGTKTVHEKSAH
nOo.2.0.1.t02893-RA
C2H2 ZF
185
207
YKCPKCNKCLSSPSALYTHKKTH
nOo.2.0.1.t02893-RA
C2H2 ZF
212
235
LQCDYCPKTFALKNYLKLHMKQVH
nOo.2.0.1.t02893-RA
C2H2 ZF
242
264
HICHYCDKSFAYAGSLQVHVRTH
nOo.2.0.1.t02893-RA
C2H2 ZF
270
292
YVCKFCPKAFASQGNLQSHERTH
nOo.2.0.1.t02893-RA
C2H2 ZF
298
320
YTCVQCGRSFIQKSQLTAHEATH
nOo.2.0.1.t02893-RA
C2H2 ZF
339
361
YVCKYCGKRYAYASSLYVHTRLH
nOo.2.0.1.t02893-RA
C2H2 ZF
367
389
FRCSFCDKTFTNQGNMQVHQRVH
nOo.2.0.1.t02893-RA
C2H2 ZF
395
416
YKCNACEKSYAQKVGLKIHLEQ
Links
Other
C2H2 ZF
family TFs
Other
Onchocerca ochengi
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00242154
Onchocerca volvulus
WBGene00242154
N
0.827
Bm10919
Brugia malayi
Bm10919
N
0.821
WUBG_03748
Wuchereria bancrofti
WUBG_03748
N
0.820
nDi.2.2.2.g05206
Dirofilaria immitis
nDi.2.2.2.g05206
N
0.819
EEL_0000837001
Elaeophora elaphi
EEL_0000837001
N
0.818
LOAG_03372
Loa loa
LOAG_03372
N
0.814
ASU_02874
Ascaris suum
ASU_02874
N
0.801
RSKR_0000771600
Rhabditophanes kr3021
RSKR_0000771600
N
0.796
L893_g2100
Steinernema glaseri
L893_g2100
N
0.793
L892_g27548
Steinernema scapterisci
L892_g27548
N
0.793
L596_g25323
Steinernema carpocapsae
L596_g25323
N
0.793
L898_g11982
Steinernema monticolum
L898_g11982
N
0.793
PTRK_0000168600
Parastrongyloides trichosuri
PTRK_0000168600
N
0.792
L889_g23172
Steinernema feltiae
L889_g23172
N
0.792
SVE_1922800
Strongyloides venezuelensis
SVE_1922800
N
0.790
SPAL_0001279900
Strongyloides papillosus
SPAL_0001279900
N
0.790
SSTP_0001241100
Strongyloides stercoralis
SSTP_0001241100
N
0.783
HCOI00939900
Haemonchus contortus
HCOI00939900
N
0.782
GPLIN_000003100
Globodera pallida
GPLIN_000003100
N
0.780
DICVIV_07953
Dictyocaulus viviparus
DICVIV_07953
N
0.775
NBR_0001172801
Nippostrongylus brasiliensis
NBR_0001172801
N
0.757