CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nOo.2.0.1.g08138
(
Onchocerca ochengi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nOo.2.0.1.g08138
T155413_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t08138-RA
C2H2 ZF
634
656
LVCNICGFSCNSKFHYNSHMNTH
nOo.2.0.1.t08138-RA
C2H2 ZF
659
682
HQCTMCDYTSRTEGRLKKHMRDSH
nOo.2.0.1.t08138-RA
C2H2 ZF
873
895
YKCKQCSHISTSKEEQWTHARTH
nOo.2.0.1.t08138-RA
C2H2 ZF
904
924
CTRCGFVTEYKHHLEYHLRNH
nOo.2.0.1.t08138-RA
C2H2 ZF
930
952
FHCKKCAYSCVNKSMLNSHMKSH
nOo.2.0.1.t08138-RA
C2H2 ZF
958
982
FRCRDCTYATKYCHSLKLHLRKYNH
Links
Other
C2H2 ZF
family TFs
Other
Onchocerca ochengi
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00238640
Onchocerca volvulus
WBGene00238640
N
0.827
LOAG_09705
Loa loa
LOAG_09705
N
0.827
TCNE_0001971201
Toxocara canis
TCNE_0001971201
N
0.822
WUBG_04275
Wuchereria bancrofti
WUBG_04275
N
0.804
Bm3336
Brugia malayi
Bm3336
N
0.804
nDi.2.2.2.g08867
Dirofilaria immitis
nDi.2.2.2.g08867
N
0.804
ASU_02375
Ascaris suum
ASU_02375
N
0.799
EVEC_0000670401
Enterobius vermicularis
EVEC_0000670401
N
0.778
SMUV_0001013301
Syphacia muris
SMUV_0001013301
N
0.776
ASIM_0001235301
Anisakis simplex
ASIM_0001235301
N
0.762
PTRK_0001125100
Parastrongyloides trichosuri
PTRK_0001125100
N
0.756