CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g46856
(
Romanomermis culicivorax
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nRc.2.0.1.g46856
T155520_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t46856-RA
C2H2 ZF
12
34
WICEECGKGFPFQSVLLNHSRIH
nRc.2.0.1.t46856-RA
C2H2 ZF
40
62
YKCQHCEKGFAQKTSLIVHERRH
nRc.2.0.1.t46856-RA
C2H2 ZF
68
90
YICEFCGKGFASQGNMKIHERQH
nRc.2.0.1.t46856-RA
C2H2 ZF
96
118
YQCKICPKRFATIGSLRTHEISH
nRc.2.0.1.t46856-RA
C2H2 ZF
129
151
FACDECGKTFSYRSSIYAHKKRH
nRc.2.0.1.t46856-RA
C2H2 ZF
185
207
WICRFCDKKFLYKHPLMAHERTH
nRc.2.0.1.t46856-RA
C2H2 ZF
213
235
FACRFCDKRFTQQTSLIMHERSH
nRc.2.0.1.t46856-RA
C2H2 ZF
239
261
HICPNCGKSFAYLSVLNAHMRTH
nRc.2.0.1.t46856-RA
C2H2 ZF
267
289
FQCTLCDKRFAQKATLVIHLRIH
nRc.2.0.1.t46856-RA
C2H2 ZF
295
317
YKCSYCDRAFAQFSSKTVHETTH
nRc.2.0.1.t46856-RA
C2H2 ZF
323
345
YACPICPKVLSSPSALYTHKQTH
nRc.2.0.1.t46856-RA
C2H2 ZF
350
373
FQCPQCPKNFTLKNYLKLHMAQVH
nRc.2.0.1.t46856-RA
C2H2 ZF
380
402
HQCTECGKVFAYAGSLVIHMRTH
nRc.2.0.1.t46856-RA
C2H2 ZF
408
430
YKCRICSKSFSSQGNMRNHERIH
nRc.2.0.1.t46856-RA
C2H2 ZF
436
458
FVCKVCGKAFVQRNQLSIHEFIH
nRc.2.0.1.t46856-RA
C2H2 ZF
468
490
FVCKHCNKKFAYPSRLYVHLRHH
nRc.2.0.1.t46856-RA
C2H2 ZF
530
551
FRCIACDKSFAQKAGLKTHTKR
Links
Other
C2H2 ZF
family TFs
Other
Romanomermis culicivorax
TFs
0 Related TFs
">No related TF found