CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0003350801
(
Protopolystoma xenopodis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PXEA_0003350801
T155862_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0003350801-mRNA-1
C2H2 ZF
119
141
YACTYCGRGFTKAYNRTIHERTH
PXEA_0003350801-mRNA-1
C2H2 ZF
147
166
FACDICARRFRRKDHLRDHR
Links
Other
C2H2 ZF
family TFs
Other
Protopolystoma xenopodis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sjc_0028750
Schistosoma japonicum
Sjc_0028750
N
0.768
TRE_0001183001
Trichobilharzia regenti
TRE_0001183001
N
0.762
SMTD_0000181401
Schistosoma mattheei
SMTD_0000181401
N
0.762
A_05914
Schistosoma haematobium
A_05914
N
0.762
SPER_0000495201
Spirometra erinaceieuropaei
SPER_0000495201
N
0.757