CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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RSKR_0000033200
(
Rhabditophanes kr3021
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RSKR_0000033200
T155869_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000033200.1
C2H2 ZF
120
142
YMCTYCDKDFRRPDILSRHLRRH
RSKR_0000033200.1
C2H2 ZF
148
170
FACEACGRFFSRSDHLRTHKRTH
RSKR_0000033200.1
C2H2 ZF
176
200
YQCTECTYAARRRDVLTRHMATRHH
Links
Other
C2H2 ZF
family TFs
Other
Rhabditophanes kr3021
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPLM_0001133101
Haemonchus placei
HPLM_0001133101
I
0.777
HCOI01254700
Haemonchus contortus
HCOI01254700
I
0.777
L889_g28325
Steinernema feltiae
L889_g28325
I
0.774
TCNE_0000622401
Toxocara canis
TCNE_0000622401
I
0.774
ANCCEY_13832
Ancylostoma ceylanicum
ANCCEY_13832
I
0.774
ANCCAN_17930
Ancylostoma caninum
ANCCAN_17930
I
0.774
PPA04971
Pristionchus pacificus
PPA04971
N
0.773
TELCIR_01018
Teladorsagia circumcincta
TELCIR_01018
I
0.773
scaffold607-EXSNAP2012.9
Pristionchus exspectatus
scaffold607-EXSNAP2012.9
N
0.773
BXY_0680200
Bursaphelenchus xylophilus
BXY_0680200
I
0.766
L596_g11489
Steinernema carpocapsae
L596_g11489
I
0.761
ASU_05504
Ascaris suum
ASU_05504
I
0.757