SBAD_0000635801 (Soboliphyme baturini)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SBAD_0000635801 T155964_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.757 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SBAD_0000635801-mRNA-1 C2H2 ZF 44 66
SBAD_0000635801-mRNA-1 C2H2 ZF 72 94
SBAD_0000635801-mRNA-1 C2H2 ZF 100 122

Links

Other C2H2 ZF family TFs
Other Soboliphyme baturini TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SBAD_0000636401 Soboliphyme baturini SBAD_0000636401 N 0.794
EFV59471 Trichinella spiralis EFV59471 N 0.781
D917_09259 Trichinella nativa D917_09259 N 0.781
D918_06537 Trichuris suis D918_06537 N 0.777
TMUE_s0035003400 Trichuris muris TMUE_s0035003400 N 0.777
TTRE_0000415001 Trichuris trichiura TTRE_0000415001 N 0.777
L898_g9710 Steinernema monticolum L898_g9710 I 0.774
BXY_1109100 Bursaphelenchus xylophilus BXY_1109100 N 0.774
nRc.2.0.1.g33153 Romanomermis culicivorax nRc.2.0.1.g33153 N 0.771
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.768
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.768
L898_g24033 Steinernema monticolum L898_g24033 I 0.768
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.768
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.768
L898_g10136 Steinernema monticolum L898_g10136 I 0.768
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.768
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.768
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.768
L892_g2739 Steinernema scapterisci L892_g2739 I 0.768
L893_g11388 Steinernema glaseri L893_g11388 I 0.768
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.768
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.768
LOAG_03108 Loa loa LOAG_03108 I 0.768
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.768
ASU_12247 Ascaris suum ASU_12247 I 0.768
Bm4236 Brugia malayi Bm4236 I 0.768
L889_g19596 Steinernema feltiae L889_g19596 I 0.768
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.768
MhA1_Contig334.frz3.gene6 Meloidogyne hapla MhA1_Contig334.frz3.gene6 I 0.767
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.764
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.764
CJA18701 Caenorhabditis japonica CJA18701 I 0.761
CBG14093 Caenorhabditis briggsae CBG14093 I 0.757
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.757
CRE00458 Caenorhabditis remanei CRE00458 I 0.757