CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold182-EXSNAP2012.34
(
Pristionchus exspectatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
scaffold182-EXSNAP2012.34
T156040_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold182-EXSNAP2012.34
C2H2 ZF
249
271
YVCAVCGFSCASKFHYNSHMNTH
scaffold182-EXSNAP2012.34
C2H2 ZF
274
297
HQCTMCDYTSRTEGRLKKHMRESH
scaffold182-EXSNAP2012.34
C2H2 ZF
448
470
MSCDKCNFVTEYKHHLEYHQRNH
scaffold182-EXSNAP2012.34
C2H2 ZF
476
498
FQCKKCAYTCVNKSMLNSHMKSH
scaffold182-EXSNAP2012.34
C2H2 ZF
504
528
FRCADCNYATKYCHSLKLHLKKYGH
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus exspectatus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g08114
Acanthocheilonema viteae
nAv.1.0.1.g08114
N
0.789
CBN04840
Caenorhabditis brenneri
CBN04840
N
0.805
CBG14758
Caenorhabditis briggsae
CBG14758
N
0.805
hbl-1
Caenorhabditis elegans
WBGene00001824
N
0.805
CJA01697
Caenorhabditis japonica
CJA01697
N
0.807
EEL_0000864301
Elaeophora elaphi
EEL_0000864301
N
0.789
nLs.2.1.2.g07756
Litomosoides sigmodontis
nLs.2.1.2.g07756
N
0.789
Ppa-hbl-1
Pristionchus pacificus
PPA26451
N
0.827
L596_g16645
Steinernema carpocapsae
L596_g16645
N
0.762
L892_g24741
Steinernema scapterisci
L892_g24741
N
0.760