CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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scaffold454-EXSNAP2012.4
(
Pristionchus exspectatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
scaffold454-EXSNAP2012.4
T156093_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold454-EXSNAP2012.4
C2H2 ZF
270
292
YHCELCNKTFKHPSKIEEHLRKH
scaffold454-EXSNAP2012.4
C2H2 ZF
298
320
FECEVCGARFTQGGSLKVHLKAH
scaffold454-EXSNAP2012.4
C2H2 ZF
326
348
YKCSFCDRHFATPYNQRVHEGVH
scaffold454-EXSNAP2012.4
C2H2 ZF
744
766
HTCTYCGKTDKYPSKIQAHMRTH
scaffold454-EXSNAP2012.4
C2H2 ZF
772
794
YKCEFCGMGFAQKTPLRMHIRRH
scaffold454-EXSNAP2012.4
C2H2 ZF
800
825
FTCEHEGCGAKFISQALLNAHLSSRH
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus exspectatus
TFs
0 Related TFs
">No related TF found