CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0002018801
(
Schistosoma margrebowiei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMRZ_0002018801
T156307_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0002018801-mRNA-1
C2H2 ZF
121
143
HTCEHCDKQFDRPSLLKRHTLTH
SMRZ_0002018801-mRNA-1
C2H2 ZF
149
171
FECKYCSKGFSTRSGVNTHERTH
SMRZ_0002018801-mRNA-1
C2H2 ZF
177
199
YVCRICGRRFAAGSNLIFHKYTH
SMRZ_0002018801-mRNA-1
C2H2 ZF
205
227
HVCSQCPKAFVTPGDLRKHEYTH
SMRZ_0002018801-mRNA-1
C2H2 ZF
233
255
YRCHLCDRGFATERNLKSHETTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma margrebowiei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMTD_0000084901
Schistosoma mattheei
SMTD_0000084901
N
0.827
Smp_166570
Schistosoma mansoni
Smp_166570
N
0.827
SCUD_0002022901
Schistosoma curassoni
SCUD_0002022901
N
0.827
ECPE_0001121901
Echinostoma caproni
ECPE_0001121901
N
0.795
SPER_0001773601
Spirometra erinaceieuropaei
SPER_0001773601
N
0.772