CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0000023601
(
Schistosoma mattheei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMTD_0000023601
T156326_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0000023601-mRNA-1
C2H2 ZF
237
259
YTCPECGKVFTAHYNLTRHMPIH
SMTD_0000023601-mRNA-1
C2H2 ZF
265
287
FICKVCNKGFRQASTLCRHKIIH
SMTD_0000023601-mRNA-1
C2H2 ZF
293
315
HICWICGKAFNRSSTLNTHSRIH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mattheei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCUD_0000030401
Schistosoma curassoni
SCUD_0000030401
N
0.827
SROB_0001476201
Schistosoma rodhaini
SROB_0001476201
N
0.827
Sjc_0019270
Schistosoma japonicum
Sjc_0019270
N
0.811
ENSMGAG00000008529
Meleagris gallopavo
ENSMGAG00000008529
N
0.774
ENSCHOG00000008621
Choloepus hoffmanni
ENSCHOG00000008621
N
0.774
ENSAMXG00000015825
Astyanax mexicanus
ENSAMXG00000015825
N
0.774
MESCA005419
Megaselia scalaris
MESCA005419
N
0.762
L892_g13398
Steinernema scapterisci
L892_g13398
N
0.762