CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0000999401
(
Schistosoma mattheei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMTD_0000999401
T156359_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0000999401-mRNA-1
C2H2 ZF
55
77
LCCSICHCFFNSPDQMSRHLNIH
SMTD_0000999401-mRNA-1
C2H2 ZF
83
106
YVCSHCNASFNQAENLYVHISLYH
SMTD_0000999401-mRNA-1
C2H2 ZF
143
164
FVCSVCQQSFESITLYEKHLHA
SMTD_0000999401-mRNA-1
C2H2 ZF
178
201
YRCRVCGMLLSSVGKIKQHYRRRH
SMTD_0000999401-mRNA-1
C2H2 ZF
292
314
YLCSVCHKKFVKPSLLKRHMTIH
SMTD_0000999401-mRNA-1
C2H2 ZF
320
342
YECVLCHARFTQKSSAKTHVLLH
SMTD_0000999401-mRNA-1
C2H2 ZF
560
583
FMCSKCPRRFISSLGLKRHVNLRH
SMTD_0000999401-mRNA-1
C2H2 ZF
591
612
ICPICQTLFLNLSALKRHMDIH
SMTD_0000999401-mRNA-1
C2H2 ZF
959
982
YGCGLCNMVYENAESLLQHNRISH
SMTD_0000999401-mRNA-1
C2H2 ZF
989
1011
FSCSSCPRSFTNPTLLLSHSRIH
SMTD_0000999401-mRNA-1
C2H2 ZF
1019
1043
LNCPLCPMSVFTKQSALSRHIIYCH
SMTD_0000999401-mRNA-1
C2H2 ZF
1051
1072
FMCSNCGIRFMMLRSLKSHVNN
SMTD_0000999401-mRNA-1
C2H2 ZF
1185
1206
ICNICNKNFTKKSDLRYHLNVH
SMTD_0000999401-mRNA-1
C2H2 ZF
1212
1235
YECDKCHRRFMKHSQLRQHKFKVH
SMTD_0000999401-mRNA-1
C2H2 ZF
1256
1278
LFCHLCGFGFSSRSSLRLHVRLH
SMTD_0000999401-mRNA-1
C2H2 ZF
1284
1305
YGCPYCNSVFHNPSHRKRHLLN
SMTD_0000999401-mRNA-1
C2H2 ZF
1574
1596
FNCTICHKTFTKNSSLTRHERIH
SMTD_0000999401-mRNA-1
C2H2 ZF
1602
1624
FICRYCNASFTQSFSLTSHELIH
SMTD_0000999401-mRNA-1
C2H2 ZF
1630
1653
YQCSQCNASFRQLCNLKRHLKLIH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mattheei
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy