SMUV_0000007001 (Syphacia muris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMUV_0000007001 T156409_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sptf-3
M00632_2.00 		Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN		 PBM
Narasimhan et al.(2015)
pTH9394 		0.804 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000007001-mRNA-1 C2H2 ZF 342 364
SMUV_0000007001-mRNA-1 C2H2 ZF 370 394
SMUV_0000007001-mRNA-1 C2H2 ZF 400 422

Links

Other C2H2 ZF family TFs
Other Syphacia muris TFs

Invalid Input OrderBy

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action