CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000886501
(
Syphacia muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMUV_0000886501
T156448_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000886501-mRNA-1
C2H2 ZF
10
32
HECQQCGKRFKARGGLQQHLRIH
SMUV_0000886501-mRNA-1
C2H2 ZF
38
60
YQCHYCIKKFTQKSHVDQHERIH
SMUV_0000886501-mRNA-1
C2H2 ZF
66
88
FPCQFCGRAFRQRSQQMGHEATH
Links
Other
C2H2 ZF
family TFs
Other
Syphacia muris
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0000060601
Anisakis simplex
ASIM_0000060601
N
0.811
TCNE_0000991701
Toxocara canis
TCNE_0000991701
N
0.807
ALUE_0001548501
Ascaris lumbricoides
ALUE_0001548501
N
0.807
ASU_00461
Ascaris suum
ASU_00461
N
0.807
TCLT_0000829601
Thelazia callipaeda
TCLT_0000829601
N
0.788
DME_0000232601
Dracunculus medinensis
DME_0000232601
N
0.787
WBGene00237415
Onchocerca volvulus
WBGene00237415
N
0.784
BTMF_0001424501
Brugia timori
BTMF_0001424501
N
0.784
EEL_0000426401
Elaeophora elaphi
EEL_0000426401
N
0.784
nOo.2.0.1.g02403
Onchocerca ochengi
nOo.2.0.1.g02403
N
0.784
Bm9460
Brugia malayi
Bm9460
N
0.784
LOAG_02659
Loa loa
LOAG_02659
N
0.784
nLs.2.1.2.g01879
Litomosoides sigmodontis
nLs.2.1.2.g01879
N
0.784
WUBG_01611
Wuchereria bancrofti
WUBG_01611
N
0.784
DICVIV_06569
Dictyocaulus viviparus
DICVIV_06569
N
0.775
Minc07456
Meloidogyne incognita
Minc07456
N
0.775
ACOC_0000564101
Angiostrongylus costaricensis
ACOC_0000564101
N
0.775
GPLIN_001283200
Globodera pallida
GPLIN_001283200
N
0.768
CRE14185
Caenorhabditis remanei
CRE14185
N
0.761