snap_masked-nMf.1.1.scaf01565-processed-gene-0.4 (Meloidogyne floridensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 snap_masked-nMf.1.1.scaf01565-processed-gene-0.4 T156464_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4-mRNA-1 C2H2 ZF 1 19
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4-mRNA-1 C2H2 ZF 25 47
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4-mRNA-1 C2H2 ZF 53 75
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4-mRNA-1 C2H2 ZF 81 103
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4-mRNA-1 C2H2 ZF 109 130

Links

Other C2H2 ZF family TFs
Other Meloidogyne floridensis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Minc14190 Meloidogyne incognita Minc14190 N 0.814
MhA1_Contig1748.frz3.gene3 Meloidogyne hapla MhA1_Contig1748.frz3.gene3 N 0.802
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I 0.777
DME_0000608401 Dracunculus medinensis DME_0000608401 I 0.770
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I 0.763
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I 0.759
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I 0.759
D918_01175 Trichuris suis D918_01175 I 0.759
Ppa-blmp-1 Pristionchus pacificus PPA04977 N 0.756
D917_07972 Trichinella nativa D917_07972 I 0.756
ACYPI000849 Acyrthosiphon pisum ACYPI000849 I 0.756
scaffold607-EXSNAP2012.2 Pristionchus exspectatus scaffold607-EXSNAP2012.2 N 0.756