CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0000648801
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0000648801
T156919_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000648801-mRNA-1
C2H2 ZF
178
205
FVCLWRECVRGTRPFKAQYMLVVHMRRH
SROB_0000648801-mRNA-1
C2H2 ZF
211
235
HKCIFEGCIKRYSRLENLKTHLRSH
SROB_0000648801-mRNA-1
C2H2 ZF
241
266
YQCEIPGCNKAFSNASDRAKHQNRTH
SROB_0000648801-mRNA-1
C2H2 ZF
272
297
YTCKVDGCSKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP11153
Atta cephalotes
ACEP11153
N
0.798
Cflo_10733--XP_624136.2_APIME
Camponotus floridanus
Cflo_10733--XP_624136.2_APIME
N
0.798
ENSP00000379255-D1
Bos grunniens
ENSP00000379255-D1
N
0.795
Myotis_brandtii_GLI3_10009944
Myotis brandtii
Myotis_brandtii_GLI3_10009944
N
0.795
Ogr17074
Ophisaurus gracilis
Ogr17074
N
0.795
SMU15013615
Schmidtea mediterranea
SMU15013615
N
0.772
gli2
Xenopus tropicalis
XB-GENE-481810
N
0.795
XP_002156924.1
Hydra magnipapillata
XP_002156924.1
N
0.765
SMRZ_0000087601
Schistosoma margrebowiei
SMRZ_0000087601
N
0.824
SMTD_0001685401
Schistosoma mattheei
SMTD_0001685401
N
0.827
Brh_R006636
Buceros rhinoceros
Brh_R006636
N
0.795
Alligator_sinensis_CCG009321.1
Alligator sinensis
Alligator_sinensis_CCG009321.1
N
0.795
Alligator_sinensis_CCG001512.1
Alligator sinensis
Alligator_sinensis_CCG001512.1
N
0.795
ACYPI45156
Acyrthosiphon pisum
ACYPI45156
N
0.792
Aqu1.217717
Amphimedon queenslandica
Aqu1.217717
N
0.760
ENSMICG00000005378
Microcebus murinus
ENSMICG00000005378
N
0.765
gli2b
Oryzias latipes
ENSORLG00000001328
N
0.783
ENSORLG00000015277
Oryzias latipes
ENSORLG00000015277
N
0.795
ENSPMAG00000007806
Petromyzon marinus
ENSPMAG00000007806
N
0.790
GLI2
Tupaia belangeri
ENSTBEG00000008264
N
0.780
ENSTGUG00000014304
Taeniopygia guttata
ENSTGUG00000014304
N
0.795
Aan_R000709
Calypte anna
Aan_R000709
N
0.795
TMUE_s0120001200
Trichuris muris
TMUE_s0120001200
N
0.765