SSLN_0000320501 (Schistocephalus solidus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SSLN_0000320501 T157042_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sp1
M00765_2.00
Mus musculus
NMCGCCCMY

RKGGGCGKN
PBM
Weirauch et al.(2013)
pTH0978
0.769 0.783
SP1
M02921_2.00
Homo sapiens
RCCMCDCCCMH

DKGGGHGKGGY
SELEX
Jolma et al.(2013)
SP1_1
0.769 0.783
SP1
M04605_2.00
Homo sapiens
NWRRCCACGCCCMCH

DGKGGGCGTGGYYWN
SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX
0.769 0.783
SP1
M08096_2.00
Homo sapiens
BYCCCKCCCCY

RGGGGMGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0079.3
0.769 0.783
SP1
M08363_2.00
Homo sapiens
CCCHNBCYCCDCCCY

RGGGHGGRGVNDGGG
ChIP-seq
Schmitges et al.(2016)
P08047.MEME
0.769 0.783
SP1
M08938_2.00
Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN

NRGGGGCGGGGCBDGGVSSSGV
Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A
0.769 0.783
Sp1
M08963_2.00
Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC

GSVSGRGVNGGGGGMGGRGMVGGG
Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A
0.769 0.783
SP1
M10294_2.00
Homo sapiens
DSCMHGCCYH

DRGGCDKGSH
Transfac
Matys et al.(2006)
V$SP1_01
0.769 0.783
SP1
M10295_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_02
0.769 0.783
SP1
M10296_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_07
0.769 0.783
SP1
M10297_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_08
0.769 0.783
SP1
M10298_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_Q2_02
0.769 0.783
SP1
M10299_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_Q3
0.769 0.783
SP1
M10300_2.00
Homo sapiens
VVCCCCGCCCMBN

NVKGGGCGGGGBB
Transfac
Matys et al.(2006)
V$SP1_Q6
0.769 0.783
SP1
M04606_2.00
Homo sapiens
NWRGCCMCGCCCMYH

DRKGGGCGKGGCYWN
SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX
0.769 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSLN_0000320501-mRNA-1 C2H2 ZF 381 403
SSLN_0000320501-mRNA-1 C2H2 ZF 409 433
SSLN_0000320501-mRNA-1 C2H2 ZF 439 461

Links

Other C2H2 ZF family TFs
Other Schistocephalus solidus TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DILT_0001409101 Diphyllobothrium latum DILT_0001409101 I 0.817
PXEA_0002750301 Protopolystoma xenopodis PXEA_0002750301 I 0.785
MCOS_0000835001 Mesocestoides corti MCOS_0000835001 I 0.777
ENSONIG00000005121 Oreochromis niloticus ENSONIG00000005121 I 0.773
sp1 Oryzias latipes ENSORLG00000005195 I 0.773
SP1 Tupaia belangeri ENSTBEG00000010202 I 0.769
ENSSTOG00000005928 Ictidomys tridecemlineatus ENSSTOG00000005928 I 0.769
SP1 Taeniopygia guttata ENSTGUG00000015642 I 0.769
sp1 Tetraodon nigroviridis ENSTNIG00000007066 I 0.769
sp1 Takifugu rubripes ENSTRUG00000014305 I 0.769
ENSTSYG00000001068 Tarsius syrichta ENSTSYG00000001068 I 0.769
SP1 Sus scrofa ENSSSCG00000000272 I 0.769
SP1 Pan troglodytes ENSPTRG00000005014 I 0.769
ENSPPYG00000004579 Pongo abelii ENSPPYG00000004579 I 0.769
ENSPFOG00000007682 Poecilia formosa ENSPFOG00000007682 I 0.769
ENSPSIG00000007013 Pelodiscus sinensis ENSPSIG00000007013 I 0.769
SP1 Tursiops truncatus ENSTTRG00000009591 I 0.769
SP1 Pteropus vampyrus ENSPVAG00000012280 I 0.769
SP1 Sorex araneus ENSSARG00000013480 I 0.769
LotgiG58417 Lottia gigantea LotgiG58417 I 0.769
Gfo_R005030 Geospiza fortis Gfo_R005030 I 0.769
ENSMMUP00000026353 Macaca fascicularis ENSMMUP00000026353 I 0.769
Myotis_brandtii_SP1_10022992 Myotis brandtii Myotis_brandtii_SP1_10022992 I 0.769
Ogr16979 Ophisaurus gracilis Ogr16979 I 0.769
Ocbimv22023102m.g Octopus bimaculoides Ocbimv22023102m.g I 0.769
Pvit_07435 Pogona vitticeps Pvit_07435 I 0.769
ENSBTAP00000003929-D1 Bos grunniens ENSBTAP00000003929-D1 I 0.769
Cmyd_10010806 Chelonia mydas Cmyd_10010806 I 0.769
NEMVEDRAFT_v1g99612 Nematostella vectensis NEMVEDRAFT_v1g99612 I 0.769
SP1 Procavia capensis ENSPCAG00000004934 I 0.769
SMAR004861 Strigamia maritima SMAR004861 I 0.769
Aan_R009568 Calypte anna Aan_R009568 I 0.769
Cmyd_10006878 Chelonia mydas Cmyd_10006878 I 0.769
Alligator_sinensis_CCG005388.1 Alligator sinensis Alligator_sinensis_CCG005388.1 I 0.769
ENSXMAG00000017829 Xiphophorus maculatus ENSXMAG00000017829 I 0.769
Sp1 Rattus norvegicus ENSRNOG00000014084 I 0.769
ENSCSAG00000005498 Chlorocebus sabaeus ENSCSAG00000005498 I 0.769
ENSPANG00000018241 Papio anubis ENSPANG00000018241 I 0.769
SP1 Dasypus novemcinctus ENSDNOG00000017346 I 0.769
ENSECAG00000020197 Equus caballus ENSECAG00000020197 I 0.769
SP1 Felis catus ENSFCAG00000030741 I 0.769
SP1 Erinaceus europaeus ENSEEUG00000013568 I 0.769
SP1 Callithrix jacchus ENSCJAG00000018553 I 0.769
SP1 Choloepus hoffmanni ENSCHOG00000001703 I 0.769
SP1 Anolis carolinensis ENSACAG00000000610 I 0.769
CGI_10007690 Crassostrea gigas CGI_10007690 I 0.769
ENSAMEG00000012479 Ailuropoda melanoleuca ENSAMEG00000012479 I 0.769
ENSAPLG00000007170 Anas platyrhynchos ENSAPLG00000007170 I 0.769
SP1 Canis familiaris ENSCAFG00000006950 I 0.769
SP1 Bos taurus ENSBTAG00000003021 I 0.769
SP1 Homo sapiens ENSG00000185591 D 0.769
SP1 Cavia porcellus ENSCPOG00000023095 I 0.769
SP1 Macaca mulatta ENSMMUG00000020036 I 0.769
SP1 Myotis lucifugus ENSMLUG00000017303 I 0.769
Sp1 Mus musculus ENSMUSG00000001280 D 0.769
ENSNLEG00000017699 Nomascus leucogenys ENSNLEG00000017699 I 0.769
SP1 Ochotona princeps ENSOPRG00000000691 I 0.769
SP1 Oryctolagus cuniculus ENSOCUG00000004147 I 0.769
ENSMEUG00000004493 Macropus eugenii ENSMEUG00000004493 I 0.769
ENSOARG00000016514 Ovis aries ENSOARG00000016514 I 0.769
SP1 Loxodonta africana ENSLAFG00000018043 I 0.769
ENSGALG00000028401 Gallus gallus ENSGALG00000028401 I 0.769
SP1 Gorilla gorilla ENSGGOG00000012593 I 0.769
SP5 Taeniopygia guttata ENSTGUG00000008736 I 0.766
ECPE_0000615101 Echinostoma caproni ECPE_0000615101 I 0.764
D917_06327 Trichinella nativa D917_06327 I 0.763
CapteG112714 Capitella teleta CapteG112714 I 0.763
EFV52785 Trichinella spiralis EFV52785 I 0.763
A_07213 Schistosoma haematobium A_07213 I 0.761
Sjc_0019150 Schistosoma japonicum Sjc_0019150 I 0.761
SMTD_0000803501 Schistosoma mattheei SMTD_0000803501 I 0.761
SMRZ_0001128801 Schistosoma margrebowiei SMRZ_0001128801 I 0.761
SCUD_0002146901 Schistosoma curassoni SCUD_0002146901 I 0.761
D915_05674 Fasciola hepatica D915_05674 I 0.760
Ocbimv22028516m.g Octopus bimaculoides Ocbimv22028516m.g I 0.757
sp1 Danio rerio ENSDARG00000088347 I 0.757
ENSGMOG00000001311 Gadus morhua ENSGMOG00000001311 I 0.757
TRE_0001792901 Trichobilharzia regenti TRE_0001792901 I 0.757
ENSGACG00000006667 Gasterosteus aculeatus ENSGACG00000006667 I 0.757
Sakowv30026949m.g Saccoglossus kowalevskii Sakowv30026949m.g I 0.757
estExt_fgenesh2_pg.C_1190055 Branchiostoma floridae estExt_fgenesh2_pg.C_1190055 I 0.756
estExt_fgenesh2_pg.C_1190044 Branchiostoma floridae estExt_fgenesh2_pg.C_1190044 I 0.756
LDEC008345 Leptinotarsa decemlineata LDEC008345 I 0.756
CapteG178994 Capitella teleta CapteG178994 I 0.756