CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0000489501
(
Schistocephalus solidus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSLN_0000489501
T157068_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0000489501-mRNA-1
C2H2 ZF
17
41
FTCEFDGCDRRFANSSDRKKHMHVH
SSLN_0000489501-mRNA-1
C2H2 ZF
47
71
YFCKFKGCDKSYTHPSSLRKHMRAH
Links
Other
C2H2 ZF
family TFs
Other
Schistocephalus solidus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRE_0000458501
Trichobilharzia regenti
TRE_0000458501
N
0.788
BTMF_0001537801
Brugia timori
BTMF_0001537801
N
0.779
nDi.2.2.2.g11925
Dirofilaria immitis
nDi.2.2.2.g11925
N
0.779
OFLC_0000964601
Onchocerca flexuosa
OFLC_0000964601
N
0.779
WUBG_07674
Wuchereria bancrofti
WUBG_07674
N
0.779
MESCA007328
Megaselia scalaris
MESCA007328
N
0.779
ECPE_0000807901
Echinostoma caproni
ECPE_0000807901
N
0.765
YQE_06158
Dendroctonus ponderosae
YQE_06158
N
0.764
ANCCAN_13802
Ancylostoma caninum
ANCCAN_13802
N
0.763
ENSTNIG00000017808
Tetraodon nigroviridis
ENSTNIG00000017808
N
0.763
TELCIR_23243
Teladorsagia circumcincta
TELCIR_23243
N
0.763
MhA1_Contig2408.frz3.gene5
Meloidogyne hapla
MhA1_Contig2408.frz3.gene5
N
0.762
ZIC5
Loxodonta africana
ENSLAFG00000009640
N
0.760
ENSCPOG00000025550
Cavia porcellus
ENSCPOG00000025550
N
0.760
ENSLACG00000015786
Latimeria chalumnae
ENSLACG00000015786
N
0.760
ZIC4
Homo sapiens
ENSG00000174963
D
0.760
Myotis_brandtii_Zic5_10007324
Myotis brandtii
Myotis_brandtii_Zic5_10007324
N
0.760
ENSSTOG00000027399
Ictidomys tridecemlineatus
ENSSTOG00000027399
I
0.760
ENSSHAG00000004201
Sarcophilus harrisii
ENSSHAG00000004201
N
0.760
ZIC5
Otolemur garnettii
ENSOGAG00000024269
N
0.760
Ocbimv22019249m.g
Octopus bimaculoides
Ocbimv22019249m.g
N
0.760
ENSXMAG00000013401
Xiphophorus maculatus
ENSXMAG00000013401
N
0.760
Alligator_sinensis_CCG018454.1
Alligator sinensis
Alligator_sinensis_CCG018454.1
N
0.760
ENSMLUG00000027631
Myotis lucifugus
ENSMLUG00000027631
N
0.760
ENSMPUG00000011382
Mustela putorius furo
ENSMPUG00000011382
N
0.760
scaffold799-EXSNAP2012.6
Pristionchus exspectatus
scaffold799-EXSNAP2012.6
N
0.757