CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0000893401
(
Strongylus vulgaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVUK_0000893401
T157470_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0000893401-mRNA-1
C2H2 ZF
45
68
TRCSQCDYEPGSLSQLSVHVRTVH
SVUK_0000893401-mRNA-1
C2H2 ZF
74
96
YVCRLCGYRGFSLRGIRSHMRSH
Links
Other
C2H2 ZF
family TFs
Other
Strongylus vulgaris
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_08104
Ancylostoma caninum
ANCCAN_08104
N
0.827
NECAME_04293
Necator americanus
NECAME_04293
N
0.827
OESDEN_13793
Oesophagostomum dentatum
OESDEN_13793
N
0.818