CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0001101901
(
Strongylus vulgaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVUK_0001101901
T157483_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0001101901-mRNA-1
C2H2 ZF
53
75
FKCDHCGRAFRQPGNLTRHRLTH
SVUK_0001101901-mRNA-1
C2H2 ZF
81
103
YVCIHCDKAFNRASNLHTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Strongylus vulgaris
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OESDEN_00257
Oesophagostomum dentatum
OESDEN_00257
N
0.822
ANCDUO_22736
Ancylostoma duodenale
ANCDUO_22736
N
0.822
CJA18173
Caenorhabditis japonica
CJA18173
I
0.811
NECAME_09892
Necator americanus
NECAME_09892
N
0.803
TCNE_0000238001
Toxocara canis
TCNE_0000238001
N
0.782
WUBG_15572
Wuchereria bancrofti
WUBG_15572
N
0.768