CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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T265_11442
(
Opisthorchis viverrini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
T265_11442
T157571_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH
DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.771
0.754
KLF2
M10210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.771
0.754
KLF2
M10211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.771
0.754
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.771
0.754
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.770
0.754
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN
NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.770
0.754
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.770
0.754
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.770
0.754
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.770
0.754
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.770
0.754
KLF4
M10217_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.770
0.754
KLF4
M10218_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.770
0.754
KLF4
M10219_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.770
0.754
KLF4
M10220_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.770
0.754
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.770
0.754
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_11442
C2H2 ZF
449
473
HTCPFSTCAKAYSKSSHLKAHMRVH
T265_11442
C2H2 ZF
479
503
FPCDWPGCSWRFARSDELTRHYRKH
T265_11442
C2H2 ZF
509
531
FQCRLCQRAFARSDHLTLHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Opisthorchis viverrini
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy