TCNE_0001220201 (Toxocara canis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TCNE_0001220201 T157787_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.779 0.851
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.779 0.851
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCNE_0001220201-mRNA-1 C2H2 ZF 579 601
TCNE_0001220201-mRNA-1 C2H2 ZF 607 629
TCNE_0001220201-mRNA-1 C2H2 ZF 635 657
TCNE_0001220201-mRNA-1 C2H2 ZF 663 685
TCNE_0001220201-mRNA-1 C2H2 ZF 691 712

Links

Other C2H2 ZF family TFs
Other Toxocara canis TFs

Invalid Input OrderBy

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action