CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TELCIR_15257
(
Teladorsagia circumcincta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TELCIR_15257
T157848_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-2
M01866_2.00
Caenorhabditis elegans
NYWGRAMCHN
NDGKTYCWRN
PBM
Weirauch et al.(2014)
pTH9049
0.788
0.953
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_15257
C2H2 ZF
165
186
TCSTCGYVGKWISEMIRHKRVH
TELCIR_15257
C2H2 ZF
192
212
FKCRYCSRTSKWKADLIRHVA
Links
Other
C2H2 ZF
family TFs
Other
Teladorsagia circumcincta
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000225801
Nippostrongylus brasiliensis
NBR_0000225801
I
0.818
HPLM_0001047401
Haemonchus placei
HPLM_0001047401
I
0.818
ANCDUO_06400
Ancylostoma duodenale
ANCDUO_06400
I
0.818
ztf-2
Caenorhabditis elegans
WBGene00008762
D
0.788