CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TELCIR_19105
(
Teladorsagia circumcincta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TELCIR_19105
T157855_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
blmp-1
M08103_2.00
Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR
ChIP-seq
Mathelier et al.(2014)
MA0537.1
0.797
0.904
blmp-1
M08195_2.00
Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB
ChIP-seq
Contrino et al.(2012)
Mw137
0.797
0.904
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_19105
C2H2 ZF
12
34
YACKECHKTFGQLSNLKVHVRTH
TELCIR_19105
C2H2 ZF
40
62
FKCTVCGKEFTQLAHLQKHNLVH
TELCIR_19105
C2H2 ZF
68
90
HRCDICDKRFSSTSNLKTHLRLH
TELCIR_19105
C2H2 ZF
96
118
YACDVCSAKFTQYVHLRLHKRLH
TELCIR_19105
C2H2 ZF
124
145
YACMSCGKKYISPSGLRTHWKT
Links
Other
C2H2 ZF
family TFs
Other
Teladorsagia circumcincta
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy