CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TsM_000018800
(
Taenia solium
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TsM_000018800
T158030_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.782
0.826
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.782
0.826
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.782
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TsM_000018800
C2H2 ZF
669
694
TTCRWGNCQCQFDSQDELVKHISNEH
TsM_000018800
C2H2 ZF
702
729
FVCFWRECVRGARPFKAQYMLVVHMRRH
TsM_000018800
C2H2 ZF
735
759
HKCIFDGCSKRYSRLENLKTHLRSH
TsM_000018800
C2H2 ZF
765
790
YQCEVPGCNKAFSNASDRAKHQNRTH
TsM_000018800
C2H2 ZF
796
821
YVCKVMGCSKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Taenia solium
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy