CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CFIO01_13496
(
Colletotrichum fioriniae
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
CFIO01_13496
T158376_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXF76083
C2H2 ZF
89
111
YQCAHCQRRYSRPEHLARHIQTH
EXF76083
C2H2 ZF
117
139
FACQICGKAFARQDLLKRHVTNH
EXF76083
Zinc cluster
163
199
HACRPCATARVKCEEQKPCTRCRNRNLNCEYSSTEAG
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Colletotrichum fioriniae
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_177
Colletotrichum gloeosporioides
CGGC5_177
N
0.988
Cob_03431
Colletotrichum orbiculare
Cob_03431
N
0.988
GLRG_01663
Colletotrichum graminicola
GLRG_01663
N
0.976
CH063_09690
Colletotrichum higginsianum
CH063_09690
N
0.964
CSUB01_03640
Colletotrichum sublineola
CSUB01_03640
N
0.964
PFICI_00473
Pestalotiopsis fici
PFICI_00473
I
0.843
VDAG_04469
Verticillium dahliae
VDAG_04469
I
0.819
estExt_Genewise1Plus.C_60463
Cryphonectria parasitica
estExt_Genewise1Plus.C_60463
I
0.735
NEUTE1DRAFT_126939
Neurospora tetrasperma
NEUTE1DRAFT_126939
I
0.707
PODANS_1_7150
Podospora anserina
PODANS_1_7150
I
0.702