CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LACBIDRAFT_308583
(
Laccaria bicolor
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
LACBIDRAFT_308583
T158498_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDR13106
C2H2 ZF
31
52
YCSLCPAKFTRTTHLNRHLRSH
EDR13106
C2H2 ZF
58
79
HRCNVCHAEFTRSDLLTRHKRT
EDR13106
Zinc cluster
92
130
KSCQACAESKVKCNLQYPCSKCSSRGRECIFINDPETSR
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Laccaria bicolor
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
K443DRAFT_114516
Laccaria amethystina
K443DRAFT_114516
N
1.000
AGABI2DRAFT_224564
Agaricus bisporus
AGABI2DRAFT_224564
N
0.940
M413DRAFT_72573
Hebeloma cylindrosporum
M413DRAFT_72573
N
0.928
GALMADRAFT_239005
Galerina marginata
GALMADRAFT_239005
N
0.916
PLEOSDRAFT_1044823
Pleurotus ostreatus
PLEOSDRAFT_1044823
N
0.904
CC1G_14936
Coprinopsis cinerea
CC1G_14936
N
0.880
GLOTRDRAFT_49480
Gloeophyllum trabeum
GLOTRDRAFT_49480
N
0.783
HETIRDRAFT_51550
Heterobasidion irregulare
HETIRDRAFT_51550
N
0.771
e_gw1.7.656.1
Heterobasidion annosum
e_gw1.7.656.1
N
0.771
SCLCIDRAFT_1157339
Scleroderma citrinum
SCLCIDRAFT_1157339
N
0.723
JAAARDRAFT_199949
Jaapia argillacea
JAAARDRAFT_199949
N
0.723
GLOTRDRAFT_39318
Gloeophyllum trabeum
GLOTRDRAFT_39318
N
0.723
PILCRDRAFT_823859
Piloderma croceum
PILCRDRAFT_823859
N
0.723
PISMIDRAFT_674177
Pisolithus microcarpus
PISMIDRAFT_674177
N
0.723