CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAN0_009c3903
(
Pseudozyma antarctica
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
PAN0_009c3903
T158579_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAK65685
C2H2 ZF
89
111
HRCDICSKTFARHEHMIRHRASH
GAK65685
C2H2 ZF
117
139
FSCDDCGKRFRRSDVLQRHRRLH
GAK65685
Zinc cluster
167
206
AACLRCSSKKLKCDAAKPSCARCRRLPDTACVYPAHSDTA
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Pseudozyma antarctica
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PaG_04061
Pseudozyma aphidis
PaG_04061
N
0.976
sr14392
Sporisorium reilianum
sr14392
N
0.859
PHSY_001478
Pseudozyma hubeiensis
PHSY_001478
N
0.812
UM03403
Ustilago maydis
UM03403
N
0.762