CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF4g04918
(
Pseudozyma brasiliensis
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
PSEUBRA_SCAF4g04918
T158626_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST05779
C2H2 ZF
62
83
FLCPNCGKTFARDDLLRRHLAR
EST05779
Zinc cluster
97
135
KSCYECARSKARCDLEVPTCGRCRARGKQCQYAPRSGNP
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Pseudozyma brasiliensis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAN0_004d2337
Pseudozyma antarctica
PAN0_004d2337
N
0.967
PaG_04684
Pseudozyma aphidis
PaG_04684
N
0.967
sr13452
Sporisorium reilianum
sr13452
N
0.951
UHOR_03717
Ustilago hordei
UHOR_03717
N
0.934
PFL1_02558
Pseudozyma flocculosa
PFL1_02558
N
0.934
PHSY_006408
Pseudozyma hubeiensis
PHSY_006408
N
0.934
UM02257
Ustilago maydis
UM02257
N
0.918
K437DRAFT_136991
Tilletiaria anomala
K437DRAFT_136991
N
0.820