CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_00583
(
Verticillium alfalfae
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
VDBG_00583
T158757_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY14475
C2H2 ZF
3
24
FCAYCGKSFTRKEHLERHIPSH
EEY14475
C2H2 ZF
30
53
HRCSACQLSFARRDLLQRHHSTYH
EEY14475
Zinc cluster
75
113
IACQNCANAKTGCDKRVPCSRCAEKSLPCAARFARRSSK
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_00583
Verticillium albo atrum
VDBG_00583
N
1.000
HMPREF1624_07443
Sporothrix schenckii
HMPREF1624_07443
N
0.988
CSUB01_07056
Colletotrichum sublineola
CSUB01_07056
N
0.988
GLRG_04200
Colletotrichum graminicola
GLRG_04200
N
0.988
CGGC5_1601
Colletotrichum gloeosporioides
CGGC5_1601
N
0.988
CFIO01_08919
Colletotrichum fioriniae
CFIO01_08919
N
0.988
e_gw1.7.34.1
Cryphonectria parasitica
e_gw1.7.34.1
N
0.976
GGTG_00416
Gaeumannomyces graminis
GGTG_00416
N
0.902
MAPG_07450
Magnaporthe poae
MAPG_07450
N
0.902
Bcin02g08760
Botrytis cinerea
Bcin02g08760
N
0.821
GMDG_07865
Pseudogymnoascus destructans
GMDG_07865
N
0.819
OIDMADRAFT_117508
Oidiodendron maius
OIDMADRAFT_117508
N
0.793
MGG_07215
Magnaporthe oryzae
MGG_07215
N
0.771