CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_02618
(
Verticillium alfalfae
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
VDBG_02618
T158758_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY16509
C2H2 ZF
20
42
HKCTICFKAFTRTDLLKRHAASH
EEY16509
Zinc cluster
68
103
KACRACASNHLRCTETKPCSRCVEKGLDCRWSNPAE
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_02618
Verticillium albo atrum
VDBG_02618
N
1.000
VDAG_09813
Verticillium dahliae
VDAG_09813
N
0.847