CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_20387
(
Neurospora discreta
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
estExt_Genewise1.C_20387
T158796_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02173
M01893_2.00
Neurospora crassa
NNRKTSSGGVNN
NNBCCSSAMYNN
PBM
Weirauch et al.(2014)
pTH9665
0.976
0.976
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_20387
C2H2 ZF
114
136
HVCQICKRVYERADHLTRHLRSH
estExt_Genewise1.C_20387
C2H2 ZF
142
164
YQCTRCPKRFNRADLLTRHETTH
estExt_Genewise1.C_20387
Zinc cluster
184
222
EACLNCAMSKAKCDDMKPCTRCRLKNLICETSNKKTPHY
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Neurospora discreta
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_149310
Neurospora tetrasperma
NEUTE1DRAFT_149310
I
0.976
NCU02173
Neurospora crassa
NCU02173
D
0.976
SMAC_05275
Sordaria macrospora
SMAC_05275
I
0.953
CGGC5_4998
Colletotrichum gloeosporioides
CGGC5_4998
I
0.812
CH063_11331
Colletotrichum higginsianum
CH063_11331
I
0.812
CFIO01_06545
Colletotrichum fioriniae
CFIO01_06545
I
0.812
GLRG_02566
Colletotrichum graminicola
GLRG_02566
I
0.798
FVEG_01911
Fusarium verticillioides
FVEG_01911
I
0.776
FGRRES_08791
Fusarium graminearum
FGRRES_08791
I
0.776
FFUJ_06263
Fusarium fujikuroi
FFUJ_06263
I
0.776
FPSE_11956
Fusarium pseudograminearum
FPSE_11956
I
0.776
FOXG_03048
Fusarium oxysporum
FOXG_03048
I
0.776
NechaG91829
Fusarium solani
NechaG91829
I
0.765
fgenesh1_pm.sca_2_chr3_3_0000229
Nectria haematococca
fgenesh1_pm.sca_2_chr3_3_0000229
I
0.765
SAPIO_CDS9919
Scedosporium apiospermum
SAPIO_CDS9919
I
0.741
VHEMI04212
Torrubiella hemipterigena
VHEMI04212
I
0.718