CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_100663
(
Cochliobolus heterostrophus C5
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
estExt_Genewise1Plus.C_100663
T158798_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_100663
C2H2 ZF
3
24
FCTYCGQSFTRDEHLERHILTH
estExt_Genewise1Plus.C_100663
C2H2 ZF
30
52
FKCFTCHMSFARRDLLQRHYTVH
estExt_Genewise1Plus.C_100663
Zinc cluster
77
114
IACSNCAKTKTKCDKKFPCTRCAQRNLKCTLRPTRRAS
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCVIDRAFT_22390
Bipolaris victoriae
COCVIDRAFT_22390
N
1.000
SETTUDRAFT_37312
Setosphaeria turcica
SETTUDRAFT_37312
N
1.000
PTRG_03318
Pyrenophora triticirepentis
PTRG_03318
N
1.000
COCMIDRAFT_1594
Bipolaris oryzae
COCMIDRAFT_1594
N
1.000
COCCADRAFT_80576
Bipolaris zeicola
COCCADRAFT_80576
N
1.000
AB02276.1
Alternaria brassicicola
AB02276.1
N
1.000
Mycgr3G87993
Zymoseptoria tritici
Mycgr3G87993
N
0.964
fgenesh1_pm.C_chr_11000085
Mycosphaerella graminicola
fgenesh1_pm.C_chr_11000085
N
0.964
UCRNP2_5080
Neofusicoccum parvum
UCRNP2_5080
N
0.964
SNOG_11987
Stagonospora nodorum
SNOG_11987
N
0.964
MPH_12259
Macrophomina phaseolina
MPH_12259
N
0.964
DOTSEDRAFT_74621
Dothistroma septosporum
DOTSEDRAFT_74621
N
0.964
estExt_Genewise1.C_380045
Mycosphaerella fijiensis
estExt_Genewise1.C_380045
N
0.952
MYCFIDRAFT_216849
Pseudocercospora fijiensis
MYCFIDRAFT_216849
N
0.952
SEPMUDRAFT_73426
Sphaerulina musiva
SEPMUDRAFT_73426
N
0.952
BAUCODRAFT_154260
Baudoinia compniacensis
BAUCODRAFT_154260
N
0.940
M437DRAFT_71311
Aureobasidium melanogenum
M437DRAFT_71311
N
0.940
AUEXF2481DRAFT_6643
Aureobasidium subglaciale
AUEXF2481DRAFT_6643
N
0.940
M438DRAFT_321969
Aureobasidium pullulans
M438DRAFT_321969
N
0.940
COCC4DRAFT_41720
Bipolaris maydis
COCC4DRAFT_41720
N
0.916
PV09_07639
Verruconis gallopava
PV09_07639
N
0.867
PTT_12899
Pyrenophora teres
PTT_12899
N
0.735