CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_sca_3_chr4_2_00984
(
Nectria haematococca
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
estExt_Genewise1Plus.C_sca_3_chr4_2_00984
T158801_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_sca_3_chr4_2_00984
C2H2 ZF
92
114
YACGDCGRRYSRPEHLQRHVQTH
estExt_Genewise1Plus.C_sca_3_chr4_2_00984
C2H2 ZF
120
142
FACGVCGKTFARADLKKRHETNH
estExt_Genewise1Plus.C_sca_3_chr4_2_00984
Zinc cluster
164
199
HACKACASARVKCQEEKPCQRCVRRGLTCVSAEAGS
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Nectria haematococca
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG68433
Fusarium solani
NechaG68433
N
1.000
FPSE_11781
Fusarium pseudograminearum
FPSE_11781
N
0.927
FGRRES_13008
Fusarium graminearum
FGRRES_13008
N
0.927
FVEG_14062
Fusarium verticillioides
FVEG_14062
N
0.905
FOXG_01941
Fusarium oxysporum
FOXG_01941
N
0.905
FFUJ_02989
Fusarium fujikuroi
FFUJ_02989
N
0.905
PFICI_00473
Pestalotiopsis fici
PFICI_00473
I
0.707
ACRE_012440
Acremonium chrysogenum
ACRE_012440
N
0.707