CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_29_chr12_4_0000107
(
Nectria haematococca
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
fgenesh1_pg.sca_29_chr12_4_0000107
T158803_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_29_chr12_4_0000107
C2H2 ZF
10
32
FLCETCNLPFQRREHYQRHLRTH
fgenesh1_pg.sca_29_chr12_4_0000107
C2H2 ZF
38
61
FSCSECGQSFGRVDSLARHHTALH
fgenesh1_pg.sca_29_chr12_4_0000107
Zinc cluster
81
118
QACKPCSASKVRCDGERPCQRCRRQDNECYYEPSAKRK
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Nectria haematococca
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG87471
Fusarium solani
NechaG87471
N
1.000
FFUJ_11894
Fusarium fujikuroi
FFUJ_11894
N
0.905