CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_chr_11000085
(
Mycosphaerella graminicola
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
fgenesh1_pm.C_chr_11000085
T158804_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_chr_11000085
C2H2 ZF
3
24
FCTYCGQSFTRDEHLERHILTH
fgenesh1_pm.C_chr_11000085
C2H2 ZF
30
52
FKCFTCHMSFARRDLLQRHYTVH
fgenesh1_pm.C_chr_11000085
Zinc cluster
77
114
IACSNCAKTKTKCDKKFPCSRCAGRNLRCTLRPTRRAS
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Mycosphaerella graminicola
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Mycgr3G87993
Zymoseptoria tritici
Mycgr3G87993
N
1.000
DOTSEDRAFT_74621
Dothistroma septosporum
DOTSEDRAFT_74621
N
1.000
MYCFIDRAFT_216849
Pseudocercospora fijiensis
MYCFIDRAFT_216849
N
0.988
SEPMUDRAFT_73426
Sphaerulina musiva
SEPMUDRAFT_73426
N
0.988
estExt_Genewise1.C_380045
Mycosphaerella fijiensis
estExt_Genewise1.C_380045
N
0.988
M438DRAFT_321969
Aureobasidium pullulans
M438DRAFT_321969
N
0.976
UCRNP2_5080
Neofusicoccum parvum
UCRNP2_5080
N
0.976
M437DRAFT_71311
Aureobasidium melanogenum
M437DRAFT_71311
N
0.976
MPH_12259
Macrophomina phaseolina
MPH_12259
N
0.976
BAUCODRAFT_154260
Baudoinia compniacensis
BAUCODRAFT_154260
N
0.976
AUEXF2481DRAFT_6643
Aureobasidium subglaciale
AUEXF2481DRAFT_6643
N
0.976
estExt_Genewise1Plus.C_100663
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_100663
N
0.964
SETTUDRAFT_37312
Setosphaeria turcica
SETTUDRAFT_37312
N
0.964
COCVIDRAFT_22390
Bipolaris victoriae
COCVIDRAFT_22390
N
0.964
COCMIDRAFT_1594
Bipolaris oryzae
COCMIDRAFT_1594
N
0.964
COCCADRAFT_80576
Bipolaris zeicola
COCCADRAFT_80576
N
0.964
PTRG_03318
Pyrenophora triticirepentis
PTRG_03318
N
0.964
AB02276.1
Alternaria brassicicola
AB02276.1
N
0.963
COCC4DRAFT_41720
Bipolaris maydis
COCC4DRAFT_41720
N
0.948
SNOG_11987
Stagonospora nodorum
SNOG_11987
N
0.940
PV09_07639
Verruconis gallopava
PV09_07639
N
0.857