fgenesh1_pm.sca_2_chr3_3_0000229 (Nectria haematococca)
C2H2 ZF,Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
fgenesh1_pm.sca_2_chr3_3_0000229 T158805_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU02173
M01893_2.00
Neurospora crassa
NNRKTSSGGVNN

NNBCCSSAMYNN
PBM
Weirauch et al.(2014)
pTH9665
0.774 0.774
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_2_chr3_3_0000229 C2H2 ZF 104 126
fgenesh1_pm.sca_2_chr3_3_0000229 C2H2 ZF 132 154
fgenesh1_pm.sca_2_chr3_3_0000229 Zinc cluster 174 211

Links

Other C2H2 ZF,Zinc cluster family TFs
Other Nectria haematococca TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NechaG91829 Fusarium solani NechaG91829 I 1.000
FOXG_03048 Fusarium oxysporum FOXG_03048 I 0.964
FFUJ_06263 Fusarium fujikuroi FFUJ_06263 I 0.964
FVEG_01911 Fusarium verticillioides FVEG_01911 I 0.964
FPSE_11956 Fusarium pseudograminearum FPSE_11956 I 0.952
FGRRES_08791 Fusarium graminearum FGRRES_08791 I 0.952
GLRG_02566 Colletotrichum graminicola GLRG_02566 I 0.869
CGGC5_4998 Colletotrichum gloeosporioides CGGC5_4998 I 0.845
CFIO01_06545 Colletotrichum fioriniae CFIO01_06545 I 0.845
CH063_11331 Colletotrichum higginsianum CH063_11331 I 0.833
SAPIO_CDS9919 Scedosporium apiospermum SAPIO_CDS9919 I 0.786
estExt_Genewise1.C_20387 Neurospora discreta estExt_Genewise1.C_20387 I 0.765
NEUTE1DRAFT_149310 Neurospora tetrasperma NEUTE1DRAFT_149310 I 0.765
SMAC_05275 Sordaria macrospora SMAC_05275 I 0.765
NCU02173 Neurospora crassa NCU02173 D 0.765
VHEMI04212 Torrubiella hemipterigena VHEMI04212 I 0.726