CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU02787
(
Neurospora crassa
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
NCU02787
T158807_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02787
M01894_2.00
Neurospora crassa
NNNNCGGRW
WYCCGNNNN
PBM
Weirauch et al.(2014)
pTH9671
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01894_2.00
C2H2 ZF
52
74
YQCADCLRRYSRPEHLQRHIATH
M01894_2.00
C2H2 ZF
80
102
FICDVCSKAFARADLLKRHRTNH
M01894_2.00
Zinc cluster
124
160
HACQACAKARVKCEEAKPCTRCKNRGISCEYGSSEDA
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU02787
C2H2 ZF
112
134
YQCADCLRRYSRPEHLQRHIATH
NCU02787
C2H2 ZF
140
162
FICDVCSKAFARADLLKRHRTNH
NCU02787
Zinc cluster
184
220
HACQACAKARVKCEEAKPCTRCKNRGISCEYGSSEDA
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Neurospora crassa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_126939
Neurospora tetrasperma
NEUTE1DRAFT_126939
I
0.960
PODANS_1_7150
Podospora anserina
PODANS_1_7150
I
0.893
estExt_Genewise1Plus.C_60463
Cryphonectria parasitica
estExt_Genewise1Plus.C_60463
I
0.771
GGTG_12224
Gaeumannomyces graminis
GGTG_12224
I
0.771
MGG_09950
Magnaporthe oryzae
MGG_09950
I
0.771
MAPG_09654
Magnaporthe poae
MAPG_09654
I
0.759
PFICI_00473
Pestalotiopsis fici
PFICI_00473
I
0.747
VDAG_04469
Verticillium dahliae
VDAG_04469
I
0.711