CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NCU02853
(
Neurospora crassa
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
NCU02853
T158808_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02853
M01895_2.00
Neurospora crassa
NNNGTSGGRD
HYCCSACNNN
PBM
Weirauch et al.(2014)
pTH9698
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01895_2.00
C2H2 ZF
8
30
HRCPVCYKTYKRREHLQRHRASH
M01895_2.00
C2H2 ZF
36
57
HRCILCSASFQRTDVLKRHIQT
M01895_2.00
Zinc cluster
70
106
RACDRCVRQKKACNSAQPCQNCSKRAVQCLYSSVGSS
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU02853
C2H2 ZF
8
30
HRCPVCYKTYKRREHLQRHRASH
NCU02853
C2H2 ZF
36
57
HRCILCSASFQRTDVLKRHIQT
NCU02853
Zinc cluster
70
106
RACDRCVRQKKACNSAQPCQNCSKRAVQCLYSSVGSS
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Neurospora crassa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1Plus.C_40363
Neurospora discreta
estExt_Genewise1Plus.C_40363
I
0.988
NEUTE1DRAFT_70945
Neurospora tetrasperma
NEUTE1DRAFT_70945
I
0.976
CTHT_0074360
Chaetomium thermophilum
CTHT_0074360
I
0.817
CHGG_02070
Chaetomium globosum
CHGG_02070
I
0.780