CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA03417
(
Caenorhabditis japonica
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
CJA03417
T158874_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-11
M00650_2.00
Caenorhabditis elegans
VAAGTTTN
NAAACTTB
PBM
Narasimhan et al.(2015)
pTH9925
0.982
0.982
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA03417
C2HC ZF
202
229
ACPTPGCDGSGHQTGLYTHHRSLSGCPR
CJA03417
C2HC ZF
248
276
RCTTPGCSGKGHVNGNRTSHRSLSGCPIA
Links
Other
C2HC ZF
family TFs
Other
Caenorhabditis japonica
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy